WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C23H3.4b Sequence Name  C23H3.4b
Length (nt)  1305   Chromosome Location  II: 51731-51882
Chromosome . Primary Identifier  II Chromosome Location . Start  51731
Chromosome Location . End  51882
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C23H3.4b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE37749 SPTL-1, isoform b 49.3 434 Caenorhabditis elegans
 

Other

22 RNAi

WormBase ID
WBRNAi00095503
WBRNAi00077482
WBRNAi00041022
WBRNAi00024601
WBRNAi00008429
WBRNAi00106535
WBRNAi00103121
WBRNAi00090861
WBRNAi00065437
WBRNAi00033443
WBRNAi00116026
WBRNAi00113060
WBRNAi00113289
WBRNAi00102770
WBRNAi00076156
WBRNAi00002075
WBRNAi00062796
WBRNAi00065436
WBRNAi00113169
WBRNAi00113132
WBRNAi00110687
WBRNAi00116420

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C23H3.4b 51731 51882 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016020 sptl-1 C23H3.4 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:C23H3.4b 51731 51882 1
CDS:C23H3.4b 51938 52138 1
CDS:C23H3.4b 52215 52615 1
CDS:C23H3.4b 56816 57278 1
CDS:C23H3.4b 57338 57425 1

1 Sequence

Length
1305

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C23H3.4b.1 C23H3.4b.1 1305   II: 51731-57425