WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C50D2.1a Sequence Name  C50D2.1a
Length (nt)  1731   Chromosome Location  II: 111687-111768
Chromosome . Primary Identifier  II Chromosome Location . Start  111687
Chromosome Location . End  111768
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C50D2.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE27874 C50D2.1, isoform a 63.2 576 Caenorhabditis elegans
 

Other

9 RNAi

WormBase ID
WBRNAi00042883
WBRNAi00012202
WBRNAi00024876
WBRNAi00024877
WBRNAi00030021
WBRNAi00106819
WBRNAi00027235
WBRNAi00064454
WBRNAi00023099

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C50D2.1a 111687 111768 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016805 C50D2.1 C50D2.1 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:C50D2.1a 111687 111768 1
CDS:C50D2.1a 112418 112749 1
CDS:C50D2.1a 112803 112884 1
CDS:C50D2.1a 112932 113437 1
CDS:C50D2.1a 113489 113572 1
CDS:C50D2.1a 113627 113858 1
CDS:C50D2.1a 113917 114128 1
CDS:C50D2.1a 114174 114374 1

1 Sequence

Length
1731

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C50D2.1a.1 C50D2.1a.1 1937   II: 111567-114460