WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T25D3.4a Sequence Name  T25D3.4a
Length (nt)  1653   Chromosome Location  II: 147273-147335
Chromosome . Primary Identifier  II Chromosome Location . Start  147273
Chromosome Location . End  147335
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T25D3.4a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE36022 T25D3.4, isoform a 60.1 550 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00054132
WBRNAi00019212
WBRNAi00035961

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:T25D3.4a 147273 147335 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020798 T25D3.4 T25D3.4 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier 		Start End Strand
CDS:T25D3.4a 147273 147335 1
CDS:T25D3.4a 147389 147445 1
CDS:T25D3.4a 147739 147834 1
CDS:T25D3.4a 148206 148283 1
CDS:T25D3.4a 148336 148398 1
CDS:T25D3.4a 148828 149046 1
CDS:T25D3.4a 149204 149491 1
CDS:T25D3.4a 149882 150144 1
CDS:T25D3.4a 150748 151045 1
CDS:T25D3.4a 151705 151932 1

1 Sequence

Length
1653

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T25D3.4a.1 T25D3.4a.1 2586   II: 147233-152825