WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T01D1.3.1 Sequence Name  T01D1.3.1
Length (nt)  795   Chromosome Location  II: 174401-175642
Chromosome . Primary Identifier  II Chromosome Location . Start  174401
Chromosome Location . End  175642 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T01D1.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020148 T01D1.3 T01D1.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T01D1.3 T01D1.3 651   II: 174541-174786

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T01D1.3.1 174401 175642 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon38096   386   II: 174401-174786 Caenorhabditis elegans
Exon38097   157   II: 175091-175247 Caenorhabditis elegans
Exon38099   164   II: 175301-175464 Caenorhabditis elegans
Exon38101   88   II: 175555-175642 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T01D1.3.1 174401 175642 -1

1 Sequence

Length
795

1 Sequence Ontology Term

Identifier Name Description
transcript