WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T01D1.4a.1 Sequence Name  T01D1.4a.1
Length (nt)  769   Chromosome Location  II: 176997-179093
Chromosome . Primary Identifier  II Chromosome Location . Start  176997
Chromosome Location . End  179093 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T01D1.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020149 T01D1.4 T01D1.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T01D1.4a T01D1.4a 480   II: 177244-177300

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T01D1.4a.1 176997 179093 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon38104   304   II: 176997-177300 Caenorhabditis elegans
Exon38107   300   II: 177604-177903 Caenorhabditis elegans
Exon38108   165   II: 178929-179093 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T01D1.4a.1 176997 179093 -1

1 Sequence

Length
769

1 Sequence Ontology Term

Identifier Name Description
transcript