WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F48A11.1a Sequence Name  F48A11.1a
Length (nt)  5007   Chromosome Location  II: 203459-203709
Chromosome . Primary Identifier  II Chromosome Location . Start  203459
Chromosome Location . End  203709
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F48A11.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE39155 CHS-2, isoform a 190.2 1668 Caenorhabditis elegans
 

Other

11 RNAi

WormBase ID
WBRNAi00008816
WBRNAi00047708
WBRNAi00001499
WBRNAi00061121
WBRNAi00061122
WBRNAi00061123
WBRNAi00061120
WBRNAi00115282
WBRNAi00061175
WBRNAi00115293
WBRNAi00085687

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F48A11.1a 203459 203709 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000497 chs-2 F48A11.1 Caenorhabditis elegans

17 Locations


Feature . Primary Identifier
Start End Strand
CDS:F48A11.1a 203459 203709 1
CDS:F48A11.1a 204185 204255 1
CDS:F48A11.1a 205413 205683 1
CDS:F48A11.1a 205957 206242 1
CDS:F48A11.1a 206295 206422 1
CDS:F48A11.1a 206832 207255 1
CDS:F48A11.1a 207305 207553 1
CDS:F48A11.1a 207600 207754 1
CDS:F48A11.1a 207800 208120 1
CDS:F48A11.1a 208169 208867 1
CDS:F48A11.1a 208918 210173 1
CDS:F48A11.1a 210220 210476 1
CDS:F48A11.1a 210523 210621 1
CDS:F48A11.1a 210669 210758 1
CDS:F48A11.1a 211098 211210 1
CDS:F48A11.1a 211259 211406 1
CDS:F48A11.1a 211461 211649 1

1 Sequence

Length
5007

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F48A11.1a.1 F48A11.1a.1 5523   II: 203235-211941