WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y43H11AL.3b Sequence Name  Y43H11AL.3b
Length (nt)  1248   Chromosome Location  II: 241114-241257
Chromosome . Primary Identifier  II Chromosome Location . Start  241114
Chromosome Location . End  241257
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y43H11AL.3b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE50846 SCC-2, isoform b 48.0 415 Caenorhabditis elegans
 

Other

8 RNAi

WormBase ID
WBRNAi00056538
WBRNAi00022482
WBRNAi00097184
WBRNAi00037066
WBRNAi00097229
WBRNAi00097274
WBRNAi00097319
WBRNAi00092864

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y43H11AL.3b 241114 241257 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004166 scc-2 Y43H11AL.3 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y43H11AL.3b 241114 241257 -1
CDS:Y43H11AL.3b 241831 241999 -1
CDS:Y43H11AL.3b 242049 242317 -1
CDS:Y43H11AL.3b 242367 242578 -1
CDS:Y43H11AL.3b 243236 243494 -1
CDS:Y43H11AL.3b 243680 243874 -1

1 Sequence

Length
1248

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y43H11AL.3b.1 Y43H11AL.3b.1 1248   II: 241114-243874