WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K01A2.7.1 Sequence Name  K01A2.7.1
Length (nt)  1443   Chromosome Location  II: 303881-305745
Chromosome . Primary Identifier  II Chromosome Location . Start  303881
Chromosome Location . End  305745 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K01A2.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000645 col-69 K01A2.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K01A2.7 K01A2.7 1185   II: 303924-304096

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K01A2.7.1 303881 305745 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon38514   216   II: 303881-304096 Caenorhabditis elegans
Exon38515   624   II: 304184-304807 Caenorhabditis elegans
Exon38516   214   II: 305094-305307 Caenorhabditis elegans
Exon38517   389   II: 305357-305745 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K01A2.7.1 303881 305745 -1

1 Sequence

Length
1443

1 Sequence Ontology Term

Identifier Name Description
transcript