WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C03H5.2.1 Sequence Name  C03H5.2.1
Length (nt)  1223   Chromosome Location  II: 388833-392732
Chromosome . Primary Identifier  II Chromosome Location . Start  388833
Chromosome Location . End  392732 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C03H5.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015404 nstp-4 C03H5.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C03H5.2 C03H5.2 1020   II: 388842-388949

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C03H5.2.1 388833 392732 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon38784   117   II: 388833-388949 Caenorhabditis elegans
Exon38785   177   II: 389155-389331 Caenorhabditis elegans
Exon38786   84   II: 389870-389953 Caenorhabditis elegans
Exon38787   193   II: 390160-390352 Caenorhabditis elegans
Exon38788   230   II: 391059-391288 Caenorhabditis elegans
Exon38789   134   II: 392160-392293 Caenorhabditis elegans
Exon38790   288   II: 392445-392732 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C03H5.2.1 388833 392732 1

1 Sequence

Length
1223

1 Sequence Ontology Term

Identifier Name Description
transcript