WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T27A1.5a Sequence Name  T27A1.5a
Length (nt)  1350   Chromosome Location  II: 522612-522910
Chromosome . Primary Identifier  II Chromosome Location . Start  522612
Chromosome Location . End  522910
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T27A1.5a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE14213 SLC-36.2, isoform a 50.4 449 Caenorhabditis elegans
 

Other

8 RNAi

WormBase ID
WBRNAi00054251
WBRNAi00019294
WBRNAi00076713
WBRNAi00036012
WBRNAi00060045
WBRNAi00060046
WBRNAi00060047
WBRNAi00060048

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T27A1.5a 522612 522910 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020837 slc-36.2 T27A1.5 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:T27A1.5a 522612 522910 1
CDS:T27A1.5a 523470 523825 1
CDS:T27A1.5a 524406 524679 1
CDS:T27A1.5a 524933 525038 1
CDS:T27A1.5a 525214 525277 1
CDS:T27A1.5a 525605 525855 1

1 Sequence

Length
1350

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T27A1.5a.1 T27A1.5a.1 1486   II: 522602-525981