WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K07E8.9.1 Sequence Name  K07E8.9.1
Length (nt)  1286   Chromosome Location  II: 659828-661796
Chromosome . Primary Identifier  II Chromosome Location . Start  659828
Chromosome Location . End  661796 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K07E8.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005557 sri-45 K07E8.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K07E8.9 K07E8.9 1023   II: 660091-660254

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K07E8.9.1 659828 661796 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon39425   427   II: 659828-660254 Caenorhabditis elegans
Exon39426   313   II: 660297-660609 Caenorhabditis elegans
Exon39427   219   II: 661157-661375 Caenorhabditis elegans
Exon39428   123   II: 661423-661545 Caenorhabditis elegans
Exon39429   204   II: 661593-661796 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K07E8.9.1 659828 661796 -1

1 Sequence

Length
1286

1 Sequence Ontology Term

Identifier Name Description
transcript