WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Hide

Oops!

http://intermine.wormbase.org/tools/wormmine/service/ is incorrect

mRNA :

WormMine ID  Transcript:T07D3.9a.1 Sequence Name  T07D3.9a.1
Length (nt)  1480   Chromosome Location  II: 898049-900735
Chromosome . Primary Identifier  II Chromosome Location . Start  898049
Chromosome Location . End  900735 Method  Coding_transcript
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T07D3.9a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020311 T07D3.9 T07D3.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T07D3.9a T07D3.9a 1326   II: 898196-898348

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T07D3.9a.1 898049 900735 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon39872   300   II: 898049-898348 Caenorhabditis elegans
Exon39874   345   II: 898407-898751 Caenorhabditis elegans
Exon39877   222   II: 899327-899548 Caenorhabditis elegans
Exon39881   145   II: 899593-899737 Caenorhabditis elegans
Exon39885   212   II: 899817-900028 Caenorhabditis elegans
Exon39889   186   II: 900431-900616 Caenorhabditis elegans
Exon39894   70   II: 900666-900735 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T07D3.9a.1 898049 900735 -1

1 Sequence

Length
1480

1 Sequence Ontology Term

Identifier Name Description
transcript