WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T07D3.9b.1 Sequence Name  T07D3.9b.1
Length (nt)  1343   Chromosome Location  II: 898196-900735
Chromosome . Primary Identifier  II Chromosome Location . Start  898196
Chromosome Location . End  900735 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T07D3.9b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020311 T07D3.9 T07D3.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T07D3.9b T07D3.9b 1191   II: 898196-898348

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T07D3.9b.1 898196 900735 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon39873   153   II: 898196-898348 Caenorhabditis elegans
Exon39876   345   II: 898407-898751 Caenorhabditis elegans
Exon39879   222   II: 899327-899548 Caenorhabditis elegans
Exon39883   145   II: 899593-899737 Caenorhabditis elegans
Exon39887   212   II: 899817-900028 Caenorhabditis elegans
Exon39892   196   II: 900431-900626 Caenorhabditis elegans
Exon39896   70   II: 900666-900735 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T07D3.9b.1 898196 900735 -1

1 Sequence

Length
1343

1 Sequence Ontology Term

Identifier Name Description
transcript