WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W09B6.3a.1 Sequence Name  W09B6.3a.1
Length (nt)  1794   Chromosome Location  II: 1123534-1127791
Chromosome . Primary Identifier  II Chromosome Location . Start  1123534
Chromosome Location . End  1127791 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W09B6.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021103 eri-3 W09B6.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W09B6.3a W09B6.3a 1737   II: 1123536-1123641

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W09B6.3a.1 1123534 1127791 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon40308   108   II: 1123534-1123641 Caenorhabditis elegans
Exon40309   74   II: 1123687-1123760 Caenorhabditis elegans
Exon40310   172   II: 1123935-1124106 Caenorhabditis elegans
Exon40311   182   II: 1124278-1124459 Caenorhabditis elegans
Exon40312   345   II: 1125040-1125384 Caenorhabditis elegans
Exon40314   167   II: 1125707-1125873 Caenorhabditis elegans
Exon40316   81   II: 1126323-1126403 Caenorhabditis elegans
Exon40319   176   II: 1126453-1126628 Caenorhabditis elegans
Exon40322   234   II: 1126751-1126984 Caenorhabditis elegans
Exon40325   89   II: 1127384-1127472 Caenorhabditis elegans
Exon40330   166   II: 1127626-1127791 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W09B6.3a.1 1123534 1127791 1

1 Sequence

Length
1794

1 Sequence Ontology Term

Identifier Name Description
transcript