WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y51H7C.6a.1 Sequence Name  Y51H7C.6a.1
Length (nt)  2723   Chromosome Location  II: 1403441-1409118
Chromosome . Primary Identifier  II Chromosome Location . Start  1403441
Chromosome Location . End  1409118 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y51H7C.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021784 cogc-4 Y51H7C.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y51H7C.6a Y51H7C.6a 2406   II: 1403611-1404040

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y51H7C.6a.1 1403441 1409118 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon40989   600   II: 1403441-1404040 Caenorhabditis elegans
Exon40992   126   II: 1404097-1404222 Caenorhabditis elegans
Exon40995   230   II: 1404275-1404504 Caenorhabditis elegans
Exon40999   165   II: 1405575-1405739 Caenorhabditis elegans
Exon41001   479   II: 1405813-1406291 Caenorhabditis elegans
Exon41003   477   II: 1407107-1407583 Caenorhabditis elegans
Exon41004   328   II: 1408045-1408372 Caenorhabditis elegans
Exon41008   318   II: 1408801-1409118 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y51H7C.6a.1 1403441 1409118 1

1 Sequence

Length
2723

1 Sequence Ontology Term

Identifier Name Description
transcript