WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C08E3.9.1 Sequence Name  C08E3.9.1
Length (nt)  1306   Chromosome Location  II: 1616829-1619048
Chromosome . Primary Identifier  II Chromosome Location . Start  1616829
Chromosome Location . End  1619048 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C08E3.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015601 fbxa-166 C08E3.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C08E3.9 C08E3.9 1152   II: 1616939-1617142

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C08E3.9.1 1616829 1619048 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon41327   314   II: 1616829-1617142 Caenorhabditis elegans
Exon41328   658   II: 1617195-1617852 Caenorhabditis elegans
Exon41329   93   II: 1618481-1618573 Caenorhabditis elegans
Exon41330   241   II: 1618808-1619048 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C08E3.9.1 1616829 1619048 -1

1 Sequence

Length
1306

1 Sequence Ontology Term

Identifier Name Description
transcript