WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F36H5.3a.1 Sequence Name  F36H5.3a.1
Length (nt)  2388   Chromosome Location  II: 1763372-1766530
Chromosome . Primary Identifier  II Chromosome Location . Start  1763372
Chromosome Location . End  1766530 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F36H5.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018102 math-28 F36H5.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F36H5.3a F36H5.3a 2187   II: 1763372-1763523

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F36H5.3a.1 1763372 1766530 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon41597   152   II: 1763372-1763523 Caenorhabditis elegans
Exon41598   278   II: 1763570-1763847 Caenorhabditis elegans
Exon41600   115   II: 1763889-1764003 Caenorhabditis elegans
Exon41602   278   II: 1764064-1764341 Caenorhabditis elegans
Exon41604   127   II: 1764383-1764509 Caenorhabditis elegans
Exon41606   342   II: 1764675-1765016 Caenorhabditis elegans
Exon41608   99   II: 1765071-1765169 Caenorhabditis elegans
Exon41610   278   II: 1765213-1765490 Caenorhabditis elegans
Exon41612   127   II: 1765535-1765661 Caenorhabditis elegans
Exon41614   278   II: 1765706-1765983 Caenorhabditis elegans
Exon41616   112   II: 1766027-1766138 Caenorhabditis elegans
Exon41619   202   II: 1766329-1766530 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F36H5.3a.1 1763372 1766530 1

1 Sequence

Length
2388

1 Sequence Ontology Term

Identifier Name Description
transcript