WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C33C12.3b.1 Sequence Name  C33C12.3b.1
Length (nt)  1413   Chromosome Location  II: 2177758-2181885
Chromosome . Primary Identifier  II Chromosome Location . Start  2177758
Chromosome Location . End  2181885 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C33C12.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016335 gba-1 C33C12.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C33C12.3b C33C12.3b 1413   II: 2177758-2177842

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C33C12.3b.1 2177758 2181885 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon42408   85   II: 2177758-2177842 Caenorhabditis elegans
Exon42410   153   II: 2178036-2178188 Caenorhabditis elegans
Exon42412   134   II: 2178536-2178669 Caenorhabditis elegans
Exon42414   73   II: 2178718-2178790 Caenorhabditis elegans
Exon42416   97   II: 2179357-2179453 Caenorhabditis elegans
Exon42418   241   II: 2179503-2179743 Caenorhabditis elegans
Exon42420   132   II: 2180272-2180403 Caenorhabditis elegans
Exon42422   87   II: 2180454-2180540 Caenorhabditis elegans
Exon42424   164   II: 2180670-2180833 Caenorhabditis elegans
Exon42426   127   II: 2181590-2181716 Caenorhabditis elegans
Exon42427   120   II: 2181766-2181885 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C33C12.3b.1 2177758 2181885 1

1 Sequence

Length
1413

1 Sequence Ontology Term

Identifier Name Description
transcript