WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T05A8.4 Sequence Name  T05A8.4
Length (nt)  2211   Chromosome Location  II: 2717615-2717714
Chromosome . Primary Identifier  II Chromosome Location . Start  2717615
Chromosome Location . End  2717714
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T05A8.4

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE30162 NEP-2 85.4 736 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00052456
WBRNAi00018193
WBRNAi00035174
WBRNAi00089146

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T05A8.4 2717615 2717714 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020230 nep-2 T05A8.4 Caenorhabditis elegans

18 Locations


Feature . Primary Identifier
Start End Strand
CDS:T05A8.4 2717615 2717714 -1
CDS:T05A8.4 2719102 2719275 -1
CDS:T05A8.4 2719598 2719793 -1
CDS:T05A8.4 2720187 2720306 -1
CDS:T05A8.4 2721209 2721267 -1
CDS:T05A8.4 2721596 2721693 -1
CDS:T05A8.4 2721744 2721827 -1
CDS:T05A8.4 2721875 2721973 -1
CDS:T05A8.4 2722397 2722515 -1
CDS:T05A8.4 2722687 2722894 -1
CDS:T05A8.4 2723351 2723488 -1
CDS:T05A8.4 2723536 2723623 -1
CDS:T05A8.4 2724000 2724088 -1
CDS:T05A8.4 2724138 2724226 -1
CDS:T05A8.4 2724380 2724583 -1
CDS:T05A8.4 2724638 2724799 -1
CDS:T05A8.4 2725121 2725285 -1
CDS:T05A8.4 2725523 2725541 -1

1 Sequence

Length
2211

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T05A8.4.1 T05A8.4.1 3482   II: 2716555-2725752