WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y110A2AL.2.1 Sequence Name  Y110A2AL.2.1
Length (nt)  1549   Chromosome Location  II: 2868001-2870841
Chromosome . Primary Identifier  II Chromosome Location . Start  2868001
Chromosome Location . End  2870841 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y110A2AL.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022439 Y110A2AL.2 Y110A2AL.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y110A2AL.2 Y110A2AL.2 1452   II: 2868015-2868069

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y110A2AL.2.1 2868001 2870841 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon43792   69   II: 2868001-2868069 Caenorhabditis elegans
Exon43793   243   II: 2868506-2868748 Caenorhabditis elegans
Exon43794   123   II: 2868796-2868918 Caenorhabditis elegans
Exon43795   126   II: 2869028-2869153 Caenorhabditis elegans
Exon43796   126   II: 2869206-2869331 Caenorhabditis elegans
Exon43797   126   II: 2869434-2869559 Caenorhabditis elegans
Exon43798   126   II: 2869668-2869793 Caenorhabditis elegans
Exon43799   126   II: 2869963-2870088 Caenorhabditis elegans
Exon43800   126   II: 2870208-2870333 Caenorhabditis elegans
Exon43801   120   II: 2870384-2870503 Caenorhabditis elegans
Exon43802   135   II: 2870555-2870689 Caenorhabditis elegans
Exon43803   103   II: 2870739-2870841 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y110A2AL.2.1 2868001 2870841 1

1 Sequence

Length
1549

1 Sequence Ontology Term

Identifier Name Description
transcript