WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y110A2AR.3a Sequence Name  Y110A2AR.3a
Length (nt)  711   Chromosome Location  II: 2913922-2913931
Chromosome . Primary Identifier  II Chromosome Location . Start  2913922
Chromosome Location . End  2913931
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y110A2AR.3a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE25196 NCAP-1, isoform a 25.2 236 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00055310
WBRNAi00019860
WBRNAi00036547
WBRNAi00098504

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y110A2AR.3a 2913922 2913931 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022453 ncap-1 Y110A2AR.3 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y110A2AR.3a 2913922 2913931 -1
CDS:Y110A2AR.3a 2914867 2914991 -1
CDS:Y110A2AR.3a 2917234 2917335 -1
CDS:Y110A2AR.3a 2917387 2917500 -1
CDS:Y110A2AR.3a 2918576 2918656 -1
CDS:Y110A2AR.3a 2918706 2918800 -1
CDS:Y110A2AR.3a 2918871 2918971 -1
CDS:Y110A2AR.3a 2919069 2919151 -1

1 Sequence

Length
711

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y110A2AR.3a.1 Y110A2AR.3a.1 1091   II: 2913705-2919314