WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C41H7.8.1 Sequence Name  C41H7.8.1
Length (nt)  1203   Chromosome Location  II: 3008700-3009948
Chromosome . Primary Identifier  II Chromosome Location . Start  3008700
Chromosome Location . End  3009948 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C41H7.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016578 sdz-5 C41H7.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C41H7.8 C41H7.8 1125   II: 3008719-3008807

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C41H7.8.1 3008700 3009948 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

2 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon44086   108   II: 3008700-3008807 Caenorhabditis elegans
Exon44087   1095   II: 3008854-3009948 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C41H7.8.1 3008700 3009948 1

1 Sequence

Length
1203

1 Sequence Ontology Term

Identifier Name Description
transcript