WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T10D4.10.1 Sequence Name  T10D4.10.1
Length (nt)  978   Chromosome Location  II: 3143394-3144652
Chromosome . Primary Identifier  II Chromosome Location . Start  3143394
Chromosome Location . End  3144652 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T10D4.10.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005555 sri-43 T10D4.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T10D4.10 T10D4.10 978   II: 3143394-3143566

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T10D4.10.1 3143394 3144652 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon44335   173   II: 3143394-3143566 Caenorhabditis elegans
Exon44336   316   II: 3143611-3143926 Caenorhabditis elegans
Exon44337   219   II: 3143972-3144190 Caenorhabditis elegans
Exon44338   123   II: 3144234-3144356 Caenorhabditis elegans
Exon44339   147   II: 3144506-3144652 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T10D4.10.1 3143394 3144652 -1

1 Sequence

Length
978

1 Sequence Ontology Term

Identifier Name Description
transcript