WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F39E9.4 Sequence Name  F39E9.4
Length (nt)  2199   Chromosome Location  II: 3282719-3282723
Chromosome . Primary Identifier  II Chromosome Location . Start  3282719
Chromosome Location . End  3282723
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F39E9.4

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE52040 NEP-13 84.5 732 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00046778
WBRNAi00014603
WBRNAi00089073

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:F39E9.4 3282719 3282723 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018196 nep-13 F39E9.4 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier 		Start End Strand
CDS:F39E9.4 3282719 3282723 1
CDS:F39E9.4 3282770 3283052 1
CDS:F39E9.4 3283096 3283231 1
CDS:F39E9.4 3284825 3284916 1
CDS:F39E9.4 3284963 3285077 1
CDS:F39E9.4 3285122 3285276 1
CDS:F39E9.4 3285334 3285435 1
CDS:F39E9.4 3285485 3285664 1
CDS:F39E9.4 3285713 3286099 1
CDS:F39E9.4 3286290 3286452 1
CDS:F39E9.4 3286504 3286913 1
CDS:F39E9.4 3286962 3287132 1

1 Sequence

Length
2199

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F39E9.4.1 F39E9.4.1 2307   II: 3282653-3287174