WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C17A2.5.1 Sequence Name  C17A2.5.1
Length (nt)  2058   Chromosome Location  II: 3833250-3836015
Chromosome . Primary Identifier  II Chromosome Location . Start  3833250
Chromosome Location . End  3836015 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C17A2.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015873 oac-4 C17A2.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C17A2.5 C17A2.5 2058   II: 3833250-3833513

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C17A2.5.1 3833250 3836015 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon46191   264   II: 3833250-3833513 Caenorhabditis elegans
Exon46192   223   II: 3833568-3833790 Caenorhabditis elegans
Exon46193   100   II: 3833831-3833930 Caenorhabditis elegans
Exon46194   130   II: 3833980-3834109 Caenorhabditis elegans
Exon46195   311   II: 3834153-3834463 Caenorhabditis elegans
Exon46196   209   II: 3834757-3834965 Caenorhabditis elegans
Exon46197   202   II: 3835010-3835211 Caenorhabditis elegans
Exon46198   87   II: 3835258-3835344 Caenorhabditis elegans
Exon46199   142   II: 3835392-3835533 Caenorhabditis elegans
Exon46200   265   II: 3835582-3835846 Caenorhabditis elegans
Exon46201   125   II: 3835891-3836015 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C17A2.5.1 3833250 3836015 -1

1 Sequence

Length
2058

1 Sequence Ontology Term

Identifier Name Description
transcript