WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R11F4.2a.1 Sequence Name  R11F4.2a.1
Length (nt)  1031   Chromosome Location  II: 4083093-4085388
Chromosome . Primary Identifier  II Chromosome Location . Start  4083093
Chromosome Location . End  4085388 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R11F4.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020008 R11F4.2 R11F4.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R11F4.2a R11F4.2a 1008   II: 4083093-4083203

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R11F4.2a.1 4083093 4085388 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon46777   111   II: 4083093-4083203 Caenorhabditis elegans
Exon46778   461   II: 4083652-4084112 Caenorhabditis elegans
Exon46780   259   II: 4084673-4084931 Caenorhabditis elegans
Exon46782   87   II: 4084985-4085071 Caenorhabditis elegans
Exon46785   113   II: 4085276-4085388 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R11F4.2a.1 4083093 4085388 1

1 Sequence

Length
1031

1 Sequence Ontology Term

Identifier Name Description
transcript