WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

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CDS :

WormMine ID  CDS:F31D5.3a Sequence Name  F31D5.3a
Length (nt)  3276   Chromosome Location  II: 4186676-4186930
Chromosome . Primary Identifier  II Chromosome Location . Start  4186676
Chromosome Location . End  4186930
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F31D5.3a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE19827 CPNA-1, isoform a 122.9 1091 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00081193
WBRNAi00001543
WBRNAi00046010
WBRNAi00014147
WBRNAi00081189
WBRNAi00092179

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F31D5.3a 4186676 4186930 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006495 cpna-1 F31D5.3 Caenorhabditis elegans

11 Locations


Feature . Primary Identifier
Start End Strand
CDS:F31D5.3a 4186676 4186930 1
CDS:F31D5.3a 4186972 4187123 1
CDS:F31D5.3a 4187468 4188148 1
CDS:F31D5.3a 4188210 4188398 1
CDS:F31D5.3a 4188901 4188966 1
CDS:F31D5.3a 4204831 4205750 1
CDS:F31D5.3a 4206002 4206039 1
CDS:F31D5.3a 4206643 4207245 1
CDS:F31D5.3a 4207294 4207431 1
CDS:F31D5.3a 4207892 4208037 1
CDS:F31D5.3a 4208179 4208266 1

1 Sequence

Length
3276

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F31D5.3a.1 F31D5.3a.1 3518   II: 4186666-4208498