WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C16A11.4a.1 Sequence Name  C16A11.4a.1
Length (nt)  1730   Chromosome Location  II: 4227046-4229157
Chromosome . Primary Identifier  II Chromosome Location . Start  4227046
Chromosome Location . End  4229157 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C16A11.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015817 C16A11.4 C16A11.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C16A11.4a C16A11.4a 1584   II: 4227057-4227640

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C16A11.4a.1 4227046 4229157 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon47235   595   II: 4227046-4227640 Caenorhabditis elegans
Exon47238   564   II: 4227693-4228256 Caenorhabditis elegans
Exon47240   373   II: 4228538-4228910 Caenorhabditis elegans
Exon47242   198   II: 4228960-4229157 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C16A11.4a.1 4227046 4229157 1

1 Sequence

Length
1730

1 Sequence Ontology Term

Identifier Name Description
transcript