WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C16A11.1a Sequence Name  C16A11.1a
Length (nt)  1092   Chromosome Location  II: 4253052-4253503
Chromosome . Primary Identifier  II Chromosome Location . Start  4253052
Chromosome Location . End  4253503
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C16A11.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE20515 GPA-11, isoform a 42.2 363 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00040641
WBRNAi00010808

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C16A11.1a 4253052 4253503 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001673 gpa-11 C16A11.1 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:C16A11.1a 4253052 4253503 1
CDS:C16A11.1a 4254220 4254348 1
CDS:C16A11.1a 4254464 4254506 1
CDS:C16A11.1a 4254814 4255281 1

1 Sequence

Length
1092

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C16A11.1a.1 C16A11.1a.1 1823   II: 4247208-4255577
Transcript:C16A11.1a.2 C16A11.1a.2 1426   II: 4251368-4255398