WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y52E8A.2.1 Sequence Name  Y52E8A.2.1
Length (nt)  680   Chromosome Location  II: 4320836-4321617
Chromosome . Primary Identifier  II Chromosome Location . Start  4320836
Chromosome Location . End  4321617 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y52E8A.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021795 Y52E8A.2 Y52E8A.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y52E8A.2 Y52E8A.2 579   II: 4320855-4320943

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y52E8A.2.1 4320836 4321617 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon47378   108   II: 4320836-4320943 Caenorhabditis elegans
Exon47379   403   II: 4320993-4321395 Caenorhabditis elegans
Exon47380   169   II: 4321449-4321617 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y52E8A.2.1 4320836 4321617 1

1 Sequence

Length
680

1 Sequence Ontology Term

Identifier Name Description
transcript