WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y52E8A.1.1 Sequence Name  Y52E8A.1.1
Length (nt)  399   Chromosome Location  II: 4322066-4322556
Chromosome . Primary Identifier  II Chromosome Location . Start  4322066
Chromosome Location . End  4322556 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y52E8A.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021794 Y52E8A.1 Y52E8A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y52E8A.1 Y52E8A.1 399   II: 4322066-4322245

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y52E8A.1.1 4322066 4322556 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon47381   180   II: 4322066-4322245 Caenorhabditis elegans
Exon47382   147   II: 4322292-4322438 Caenorhabditis elegans
Exon47383   72   II: 4322485-4322556 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y52E8A.1.1 4322066 4322556 1

1 Sequence

Length
399

1 Sequence Ontology Term

Identifier Name Description
transcript