WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T05C1.4c.1 Sequence Name  T05C1.4c.1
Length (nt)  1060   Chromosome Location  II: 4491152-4493472
Chromosome . Primary Identifier  II Chromosome Location . Start  4491152
Chromosome Location . End  4493472 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T05C1.4c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020251 camt-1 T05C1.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T05C1.4c T05C1.4c 723   II: 4491400-4491504

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T05C1.4c.1 4491152 4493472 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon47842   353   II: 4491152-4491504 Caenorhabditis elegans
Exon47846   103   II: 4491677-4491779 Caenorhabditis elegans
Exon47850   224   II: 4492205-4492428 Caenorhabditis elegans
Exon47854   215   II: 4492611-4492825 Caenorhabditis elegans
Exon47855   165   II: 4493308-4493472 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T05C1.4c.1 4491152 4493472 -1

1 Sequence

Length
1060

1 Sequence Ontology Term

Identifier Name Description
transcript