WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R05F9.1a Sequence Name  R05F9.1a
Length (nt)  1476   Chromosome Location  II: 4908674-4908719
Chromosome . Primary Identifier  II Chromosome Location . Start  4908674
Chromosome Location . End  4908719
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R05F9.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE04803 BTBD-10, isoform a 54.1 491 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00051313
WBRNAi00009034
WBRNAi00034616
WBRNAi00113564
WBRNAi00061563

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:R05F9.1a 4908674 4908719 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019888 btbd-10 R05F9.1 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:R05F9.1a 4908674 4908719 1
CDS:R05F9.1a 4908808 4908942 1
CDS:R05F9.1a 4909332 4909435 1
CDS:R05F9.1a 4909517 4910416 1
CDS:R05F9.1a 4910746 4910973 1
CDS:R05F9.1a 4911356 4911418 1

1 Sequence

Length
1476

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R05F9.1a.1 R05F9.1a.1 2028   II: 4908539-4911835