WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R05F9.1c Sequence Name  R05F9.1c
Length (nt)  1164   Chromosome Location  II: 4909544-4910416
Chromosome . Primary Identifier  II Chromosome Location . Start  4909544
Chromosome Location . End  4910416
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R05F9.1c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE33431 BTBD-10, isoform c 43.8 387 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00051313
WBRNAi00009034
WBRNAi00034616
WBRNAi00113564
WBRNAi00061563

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:R05F9.1c 4909544 4910416 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019888 btbd-10 R05F9.1 Caenorhabditis elegans

3 Locations


Feature . Primary Identifier
Start End Strand
CDS:R05F9.1c 4909544 4910416 1
CDS:R05F9.1c 4910746 4910973 1
CDS:R05F9.1c 4911356 4911418 1

1 Sequence

Length
1164

1 Sequence Ontology Term

Identifier Name Description
CDS  

4 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R05F9.1c.1 R05F9.1c.1 1886   II: 4905855-4911805
Transcript:R05F9.1c.2 R05F9.1c.2 1803   II: 4908801-4911784
Transcript:R05F9.1c.3 R05F9.1c.3 1659   II: 4909331-4911781
Transcript:R05F9.1c.4 R05F9.1c.4 1555   II: 4909516-4911781