WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y38A8.2 Sequence Name  Y38A8.2
Length (nt)  615   Chromosome Location  II: 4954673-4954836
Chromosome . Primary Identifier  II Chromosome Location . Start  4954673
Chromosome Location . End  4954836
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y38A8.2

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE07571 PBS-3 22.7 204 Caenorhabditis elegans
 

Other

18 RNAi

WormBase ID
WBRNAi00095777
WBRNAi00009307
WBRNAi00085341
WBRNAi00093512
WBRNAi00093517
WBRNAi00112136
WBRNAi00090976
WBRNAi00078725
WBRNAi00078760
WBRNAi00078791
WBRNAi00036823
WBRNAi00092753
WBRNAi00080716
WBRNAi00080687
WBRNAi00064989
WBRNAi00055977
WBRNAi00026651
WBRNAi00076769

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y38A8.2 4954673 4954836 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003949 pbs-3 Y38A8.2 Caenorhabditis elegans

3 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y38A8.2 4954673 4954836 -1
CDS:Y38A8.2 4954886 4955283 -1
CDS:Y38A8.2 4955335 4955387 -1

1 Sequence

Length
615

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y38A8.2.1 Y38A8.2.1 848   II: 4954480-4955427