WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C04G6.1a Sequence Name  C04G6.1a
Length (nt)  1818   Chromosome Location  II: 5104464-5104562
Chromosome . Primary Identifier  II Chromosome Location . Start  5104464
Chromosome Location . End  5104562
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C04G6.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE31290 MPK-2, isoform a 69.2 605 Caenorhabditis elegans
 

Other

9 RNAi

WormBase ID
WBRNAi00113186
WBRNAi00039667
WBRNAi00010153
WBRNAi00076078
WBRNAi00028462
WBRNAi00112956
WBRNAi00113100
WBRNAi00113154
WBRNAi00087945

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C04G6.1a 5104464 5104562 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003402 mpk-2 C04G6.1 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier
Start End Strand
CDS:C04G6.1a 5104464 5104562 1
CDS:C04G6.1a 5104640 5104771 1
CDS:C04G6.1a 5104828 5105109 1
CDS:C04G6.1a 5105411 5105569 1
CDS:C04G6.1a 5105617 5105684 1
CDS:C04G6.1a 5106095 5106347 1
CDS:C04G6.1a 5106397 5106503 1
CDS:C04G6.1a 5106812 5106925 1
CDS:C04G6.1a 5107616 5107740 1
CDS:C04G6.1a 5107789 5108032 1
CDS:C04G6.1a 5108527 5108656 1
CDS:C04G6.1a 5108705 5108809 1

1 Sequence

Length
1818

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C04G6.1a.1 C04G6.1a.1 1910   II: 5104464-5108901