WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F58A6.10b.1 Sequence Name  F58A6.10b.1
Length (nt)  1070   Chromosome Location  II: 5153103-5154639
Chromosome . Primary Identifier  II Chromosome Location . Start  5153103
Chromosome Location . End  5154639 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F58A6.10b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019027 srb-12 F58A6.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F58A6.10b F58A6.10b 1053   II: 5153119-5153521

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F58A6.10b.1 5153103 5154639 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon49423   419   II: 5153103-5153521 Caenorhabditis elegans
Exon49426   197   II: 5153882-5154078 Caenorhabditis elegans
Exon49428   219   II: 5154127-5154345 Caenorhabditis elegans
Exon49429   235   II: 5154405-5154639 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F58A6.10b.1 5153103 5154639 -1

1 Sequence

Length
1070

1 Sequence Ontology Term

Identifier Name Description
transcript