WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C27D6.8.1 Sequence Name  C27D6.8.1
Length (nt)  1026   Chromosome Location  II: 5165315-5166838
Chromosome . Primary Identifier  II Chromosome Location . Start  5165315
Chromosome Location . End  5166838 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C27D6.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005068 srb-3 C27D6.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C27D6.8 C27D6.8 1026   II: 5165315-5165887

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C27D6.8.1 5165315 5166838 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon49452   573   II: 5165315-5165887 Caenorhabditis elegans
Exon49453   219   II: 5165946-5166164 Caenorhabditis elegans
Exon49454   234   II: 5166605-5166838 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C27D6.8.1 5165315 5166838 -1

1 Sequence

Length
1026

1 Sequence Ontology Term

Identifier Name Description
transcript