WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C54A12.2a Sequence Name  C54A12.2a
Length (nt)  987   Chromosome Location  II: 5253245-5253320
Chromosome . Primary Identifier  II Chromosome Location . Start  5253245
Chromosome Location . End  5253320
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C54A12.2a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE51380 FRPR-4, isoform a 39.0 328 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00043107
WBRNAi00012370

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C54A12.2a 5253245 5253320 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016909 frpr-4 C54A12.2 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:C54A12.2a 5253245 5253320 -1
CDS:C54A12.2a 5253436 5253560 -1
CDS:C54A12.2a 5253606 5254034 -1
CDS:C54A12.2a 5254309 5254450 -1
CDS:C54A12.2a 5254701 5254792 -1
CDS:C54A12.2a 5255407 5255529 -1

1 Sequence

Length
987

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C54A12.2a.1 C54A12.2a.1 987   II: 5253245-5255529