WormMine: Gene WBGene00219881

• WormBase Gene ID: WBGene00219881
• Gene Name: F08B1.8
• Sequence Name: F08B1.8
• Organism: Caenorhabditis elegans
• Automated Description: Enriched in neurons and sensory neurons based on RNA-seq studies. Is affected by dpy-21; dlc-1; and mrps-5 based on RNA-seq and microarray studies. Is affected by Cadmium Chloride based on RNA-seq studies.
• Biotype: SO:0001263
• Genetic Position: :±
• Length (nt): 57

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: WBGene00219881

Genomics

1 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:F08B1.8	F08B1.8	57	II: 5335930-5335986

Other

0 CDSs

65 RNAi Result

• WBRNAi00102209
• WBRNAi00102208
• WBRNAi00102211
• WBRNAi00102210
• WBRNAi00030627
• WBRNAi00102146
• WBRNAi00102148
• WBRNAi00102152
• WBRNAi00074098
• WBRNAi00074100
• WBRNAi00074102
• WBRNAi00072410
• WBRNAi00074097
• WBRNAi00074099
• WBRNAi00074101
• WBRNAi00074103
• WBRNAi00074104
• WBRNAi00102151
• WBRNAi00102131
• WBRNAi00102119
• WBRNAi00102120
• WBRNAi00102154
• WBRNAi00102215
• WBRNAi00102153
• WBRNAi00102220
• WBRNAi00102135
• WBRNAi00102138
• WBRNAi00102207
• WBRNAi00102206
• WBRNAi00102228

3 Allele

• gk963801
• gk963053
• gk963388

1 Chromosome

• WormBase ID: II
• Organism: Caenorhabditis elegans
• Length (nt): 15279421

1 Chromosome Location

• Feature . Primary Identifier: WBGene00219881
• Start: 5335930
• End: 5335986
• Strand: 1

2 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)

0 Downstream Intergenic Region

6 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
	Neuronally enriched transcripts according to a comparison of neuronal nuclei IP samples to total nuclei using isolation of nuclei from tagged specific cell types (INTACT) technology.	DESEQ2, fold change > 2 and FDR < 0.01.	WBPaper00062103:neuron_enriched
	Transcripts that interact with 3xFLAG-DLC-1 as identified by immunoprecipitation followed by RNA sequencing.	DESeq2, fold change > 2,, p-value < 0.01	WBPaper00055334:DLC-1_interacting
	Transcripts that showed significantly increased expression in N2 animals exposed to 30 uM CdCl2 for five days starting from L4.	edgeR, fold change > 2, p < 0.05.	WBPaper00066204:CdCl2_upregulated_mRNA
	Transcripts that showed significantly increased expression in mrps-5(RNAi) comparing to in control animals.	Fold change > 4, p-value < 0.01	WBPaper00056330:mrps-5(RNAi)_upregulated
	Transcripts that showed significantly increased expression in sensory neuron (labeled by iaIs25[Pgcy-37::GFP + unc-119(+)]) comparing to in whole worm.	Fold change > 2, p-value < 0.05.	WBPaper00060661:sensory-neuron_enriched
	Transcripts that showed significantly decreased expression in dpy-21(e428) comparing to in N2 during L3 stage.	DESeq v1.6.3. Fold change > 1.5.	WBPaper00050370:dpy-21(e428)_L3_downregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations

• Feature . Primary Identifier: WBGene00219881
• Start: 5335930
• End: 5335986
• Strand: 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

• Length: 57

1 Sequence Ontology Term