WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F08B1.1f Sequence Name  F08B1.1f
Length (nt)  1509   Chromosome Location  II: 5338228-5338356
Chromosome . Primary Identifier  II Chromosome Location . Start  5338228
Chromosome Location . End  5338356
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F08B1.1f

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE52123 VHP-1, isoform f 53.3 502 Caenorhabditis elegans
 

Other

96 RNAi

WormBase ID
WBRNAi00095557
WBRNAi00102024
WBRNAi00043958
WBRNAi00008607
WBRNAi00102209
WBRNAi00102208
WBRNAi00102211
WBRNAi00102210
WBRNAi00030627
WBRNAi00093237
WBRNAi00093238
WBRNAi00093239
WBRNAi00068574
WBRNAi00068575
WBRNAi00068576
WBRNAi00068577
WBRNAi00112751
WBRNAi00112753
WBRNAi00112750
WBRNAi00102146
WBRNAi00102148
WBRNAi00102152
WBRNAi00113211
WBRNAi00074098
WBRNAi00074100
WBRNAi00074102
WBRNAi00072410
WBRNAi00074097
WBRNAi00074099
WBRNAi00074101

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F08B1.1f 5338228 5338356 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006923 vhp-1 F08B1.1 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:F08B1.1f 5338228 5338356 1
CDS:F08B1.1f 5338740 5339014 1
CDS:F08B1.1f 5339075 5339966 1
CDS:F08B1.1f 5340035 5340247 1

1 Sequence

Length
1509

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F08B1.1f.1 F08B1.1f.1 1509   II: 5338228-5340247