WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F09E5.2 Sequence Name  F09E5.2
Length (nt)  1203   Chromosome Location  II: 5375268-5375427
Chromosome . Primary Identifier  II Chromosome Location . Start  5375268
Chromosome Location . End  5375427
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F09E5.2

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE32364 ALGN-2 45.6 400 Caenorhabditis elegans
 

Other

16 RNAi

WormBase ID
WBRNAi00102984
WBRNAi00102994
WBRNAi00105968
WBRNAi00085827
WBRNAi00025044
WBRNAi00008619
WBRNAi00044127
WBRNAi00115283
WBRNAi00115263
WBRNAi00102974
WBRNAi00115290
WBRNAi00115260
WBRNAi00115325
WBRNAi00115327
WBRNAi00115335
WBRNAi00115338

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F09E5.2 5375268 5375427 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017282 algn-2 F09E5.2 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:F09E5.2 5375268 5375427 1
CDS:F09E5.2 5375845 5376378 1
CDS:F09E5.2 5376431 5376579 1
CDS:F09E5.2 5376627 5376986 1

1 Sequence

Length
1203

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F09E5.2.1 F09E5.2.1 1329   II: 5375267-5377111