WormMine: MRNA Transcript:C25H3.11a.1

• WormMine ID: Transcript:C25H3.11a.1
• Sequence Name: C25H3.11a.1
• Length (nt): 10414
• Chromosome Location: II: 5669771-5689030
• Chromosome . Primary Identifier: II
• Chromosome Location . Start: 5669771
• Chromosome Location . End: 5689030
• Method: Coding_transcript

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: C25H3.11a.1

Genomics

1 Gene

WormBase Gene ID	Gene Name	Sequence Name	Organism
WBGene00016120	vps-13D	C25H3.11	Caenorhabditis elegans

Other

1 CDSs

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
CDS:C25H3.11a	C25H3.11a	9945	II: 5670163-5670350

1 Chromosome

• WormBase ID: II
• Organism: Caenorhabditis elegans
• Length (nt): 15279421

1 Chromosome Location

• Feature . Primary Identifier: Transcript:C25H3.11a.1
• Start: 5669771
• End: 5689030
• Strand: -1

3 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)
• WormBase C. elegans transcript sequence (Fasta)

22 Exons

WormBase ID	Name	Sequence Name	Length (nt)	Chromosome Location	Organism
Exon51063			580	II: 5669771-5670350	Caenorhabditis elegans
Exon51067			100	II: 5670406-5670505	Caenorhabditis elegans
Exon51071			229	II: 5670554-5670782	Caenorhabditis elegans
Exon51075			709	II: 5670843-5671551	Caenorhabditis elegans
Exon51079			558	II: 5671597-5672154	Caenorhabditis elegans
Exon51083			1072	II: 5672204-5673275	Caenorhabditis elegans
Exon51089			1025	II: 5673326-5674350	Caenorhabditis elegans
Exon51091			735	II: 5674397-5675131	Caenorhabditis elegans
Exon51095			105	II: 5675178-5675282	Caenorhabditis elegans
Exon51099			145	II: 5675332-5675476	Caenorhabditis elegans
Exon51103			30	II: 5675684-5675713	Caenorhabditis elegans
Exon51105			449	II: 5675783-5676231	Caenorhabditis elegans
Exon51109			191	II: 5676282-5676472	Caenorhabditis elegans
Exon51113			1201	II: 5677043-5678243	Caenorhabditis elegans
Exon51118			376	II: 5678925-5679300	Caenorhabditis elegans
Exon51126			167	II: 5684491-5684657	Caenorhabditis elegans
Exon51130			238	II: 5685022-5685259	Caenorhabditis elegans
Exon51134			1453	II: 5685308-5686760	Caenorhabditis elegans
Exon51138			509	II: 5687062-5687570	Caenorhabditis elegans
Exon51142			368	II: 5688245-5688612	Caenorhabditis elegans
Exon51147			109	II: 5688808-5688916	Caenorhabditis elegans
Exon51150			65	II: 5688966-5689030	Caenorhabditis elegans

1 Locations

• Feature . Primary Identifier: Transcript:C25H3.11a.1
• Start: 5669771
• End: 5689030
• Strand: -1

1 Sequence

• Length: 10414

1 Sequence Ontology Term

• Name: transcript