WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C18A3.5c Sequence Name  C18A3.5c
Length (nt)  312   Chromosome Location  II: 5714150-5714157
Chromosome . Primary Identifier  II Chromosome Location . Start  5714150
Chromosome Location . End  5714157
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C18A3.5c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE27710 TIAR-1, isoform c 11.4 103 Caenorhabditis elegans
 

Other

13 RNAi

WormBase ID
WBRNAi00073935
WBRNAi00073936
WBRNAi00073937
WBRNAi00073938
WBRNAi00073939
WBRNAi00073940
WBRNAi00073941
WBRNAi00072349
WBRNAi00040885
WBRNAi00112356
WBRNAi00029047
WBRNAi00112352
WBRNAi00098566

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C18A3.5c 5714150 5714157 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015943 tiar-1 C18A3.5 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:C18A3.5c 5714150 5714157 -1
CDS:C18A3.5c 5714293 5714356 -1
CDS:C18A3.5c 5714494 5714590 -1
CDS:C18A3.5c 5714663 5714805 -1

1 Sequence

Length
312

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C18A3.5c.1 C18A3.5c.1 1811   II: 5712338-5714823