WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK1248.10.1 Sequence Name  ZK1248.10.1
Length (nt)  2974   Chromosome Location  II: 5823856-5827443
Chromosome . Primary Identifier  II Chromosome Location . Start  5823856
Chromosome Location . End  5827443 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK1248.10.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022880 tbc-2 ZK1248.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK1248.10 ZK1248.10 2727   II: 5824086-5824106

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK1248.10.1 5823856 5827443 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon51523   251   II: 5823856-5824106 Caenorhabditis elegans
Exon51524   143   II: 5824157-5824299 Caenorhabditis elegans
Exon51525   517   II: 5824351-5824867 Caenorhabditis elegans
Exon51526   467   II: 5824916-5825382 Caenorhabditis elegans
Exon51527   245   II: 5825434-5825678 Caenorhabditis elegans
Exon51528   384   II: 5825726-5826109 Caenorhabditis elegans
Exon51529   137   II: 5826159-5826295 Caenorhabditis elegans
Exon51530   141   II: 5826343-5826483 Caenorhabditis elegans
Exon51531   415   II: 5826528-5826942 Caenorhabditis elegans
Exon51532   179   II: 5826987-5827165 Caenorhabditis elegans
Exon51533   95   II: 5827349-5827443 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK1248.10.1 5823856 5827443 -1

1 Sequence

Length
2974

1 Sequence Ontology Term

Identifier Name Description
transcript