WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK1248.1.1 Sequence Name  ZK1248.1.1
Length (nt)  1596   Chromosome Location  II: 5842240-5844620
Chromosome . Primary Identifier  II Chromosome Location . Start  5842240
Chromosome Location . End  5844620 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK1248.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022874 nep-25 ZK1248.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK1248.1 ZK1248.1 1548   II: 5842243-5842343

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK1248.1.1 5842240 5844620 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon51575   104   II: 5842240-5842343 Caenorhabditis elegans
Exon51576   151   II: 5842395-5842545 Caenorhabditis elegans
Exon51577   68   II: 5842594-5842661 Caenorhabditis elegans
Exon51578   163   II: 5842760-5842922 Caenorhabditis elegans
Exon51579   278   II: 5842966-5843243 Caenorhabditis elegans
Exon51580   160   II: 5843434-5843593 Caenorhabditis elegans
Exon51581   63   II: 5843640-5843702 Caenorhabditis elegans
Exon51582   180   II: 5843748-5843927 Caenorhabditis elegans
Exon51583   174   II: 5844146-5844319 Caenorhabditis elegans
Exon51584   255   II: 5844366-5844620 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK1248.1.1 5842240 5844620 1

1 Sequence

Length
1596

1 Sequence Ontology Term

Identifier Name Description
transcript