WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H41C03.1.1 Sequence Name  H41C03.1.1
Length (nt)  1429   Chromosome Location  II: 5854422-5857176
Chromosome . Primary Identifier  II Chromosome Location . Start  5854422
Chromosome Location . End  5857176 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H41C03.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019268 H41C03.1 H41C03.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H41C03.1 H41C03.1 1191   II: 5854550-5854594

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H41C03.1.1 5854422 5857176 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon51636   173   II: 5854422-5854594 Caenorhabditis elegans
Exon51637   202   II: 5855240-5855441 Caenorhabditis elegans
Exon51638   106   II: 5855488-5855593 Caenorhabditis elegans
Exon51639   325   II: 5855640-5855964 Caenorhabditis elegans
Exon51640   251   II: 5856461-5856711 Caenorhabditis elegans
Exon51641   101   II: 5856764-5856864 Caenorhabditis elegans
Exon51642   271   II: 5856906-5857176 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H41C03.1.1 5854422 5857176 1

1 Sequence

Length
1429

1 Sequence Ontology Term

Identifier Name Description
transcript