WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F28B12.2i.1 Sequence Name  F28B12.2i.1
Length (nt)  1482   Chromosome Location  II: 5933537-5940228
Chromosome . Primary Identifier  II Chromosome Location . Start  5933537
Chromosome Location . End  5940228 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F28B12.2i.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001208 egl-44 F28B12.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F28B12.2i F28B12.2i 1482   II: 5933537-5933581

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F28B12.2i.1 5933537 5940228 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon51845   45   II: 5933537-5933581 Caenorhabditis elegans
Exon51852   44   II: 5936441-5936484 Caenorhabditis elegans
Exon51863   94   II: 5936572-5936665 Caenorhabditis elegans
Exon51878   199   II: 5937053-5937251 Caenorhabditis elegans
Exon51891   149   II: 5938537-5938685 Caenorhabditis elegans
Exon51903   184   II: 5938738-5938921 Caenorhabditis elegans
Exon51916   376   II: 5938978-5939353 Caenorhabditis elegans
Exon51929   109   II: 5939410-5939518 Caenorhabditis elegans
Exon51942   153   II: 5939569-5939721 Caenorhabditis elegans
Exon51948   129   II: 5940100-5940228 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F28B12.2i.1 5933537 5940228 1

1 Sequence

Length
1482

1 Sequence Ontology Term

Identifier Name Description
transcript