WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R12C12.3.1 Sequence Name  R12C12.3.1
Length (nt)  1166   Chromosome Location  II: 6029491-6031206
Chromosome . Primary Identifier  II Chromosome Location . Start  6029491
Chromosome Location . End  6031206 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R12C12.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020023 frpr-16 R12C12.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R12C12.3 R12C12.3 1023   II: 6029610-6029715

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R12C12.3.1 6029491 6031206 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon52090   225   II: 6029491-6029715 Caenorhabditis elegans
Exon52091   125   II: 6029860-6029984 Caenorhabditis elegans
Exon52092   316   II: 6030034-6030349 Caenorhabditis elegans
Exon52093   104   II: 6030557-6030660 Caenorhabditis elegans
Exon52094   157   II: 6030708-6030864 Caenorhabditis elegans
Exon52095   92   II: 6030921-6031012 Caenorhabditis elegans
Exon52096   147   II: 6031060-6031206 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R12C12.3.1 6029491 6031206 -1

1 Sequence

Length
1166

1 Sequence Ontology Term

Identifier Name Description
transcript