WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F57F10.1c.1 Sequence Name  F57F10.1c.1
Length (nt)  2675   Chromosome Location  II: 6136094-6156849
Chromosome . Primary Identifier  II Chromosome Location . Start  6136094
Chromosome Location . End  6156849 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F57F10.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019018 abts-3 F57F10.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F57F10.1c F57F10.1c 2673   II: 6136096-6136285

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F57F10.1c.1 6136094 6156849 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon52296   192   II: 6136094-6136285 Caenorhabditis elegans
Exon52299   156   II: 6137835-6137990 Caenorhabditis elegans
Exon52309   110   II: 6151147-6151256 Caenorhabditis elegans
Exon52316   53   II: 6151614-6151666 Caenorhabditis elegans
Exon52323   89   II: 6152641-6152729 Caenorhabditis elegans
Exon52329   91   II: 6153098-6153188 Caenorhabditis elegans
Exon52335   124   II: 6153524-6153647 Caenorhabditis elegans
Exon52341   207   II: 6153789-6153995 Caenorhabditis elegans
Exon52347   211   II: 6154041-6154251 Caenorhabditis elegans
Exon52353   114   II: 6154296-6154409 Caenorhabditis elegans
Exon52359   207   II: 6154458-6154664 Caenorhabditis elegans
Exon52365   345   II: 6154935-6155279 Caenorhabditis elegans
Exon52371   169   II: 6155380-6155548 Caenorhabditis elegans
Exon52377   174   II: 6155597-6155770 Caenorhabditis elegans
Exon52383   199   II: 6155823-6156021 Caenorhabditis elegans
Exon52389   170   II: 6156569-6156738 Caenorhabditis elegans
Exon52392   64   II: 6156786-6156849 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F57F10.1c.1 6136094 6156849 1

1 Sequence

Length
2675

1 Sequence Ontology Term

Identifier Name Description
transcript